BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004G11LP1|AL425288
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1601 1880 0.0
>3x_Contig1601
Length = 11162
Score = 1880 bits (947), Expect = 0.0
Identities = 977/983 (99%), Gaps = 4/983 (0%)
Strand = Plus / Plus
Query: 1 gaatccgctcgtttggacgccgaattgaagttggctggtgaatacggtttgaagaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6471 gaatccgctcgtttggacgccgaattgaagttggctggtgaatacggtttgaagaacaag 6530
Query: 61 agagaaatttacagaatttctttccaattgtctaagatcagaagagccgccagagatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6531 agagaaatttacagaatttctttccaattgtctaagatcagaagagccgccagagatttg 6590
Query: 121 ttgaccagagacgaaaaggacccaaagagattgttcgaaggtaatgctttgatcagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6591 ttgaccagagacgaaaaggacccaaagagattgttcgaaggtaatgctttgatcagaaga 6650
Query: 181 ttggtgagaattggtgtcttgtctgaagacaagaagaagttggattatgtcttggctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6651 ttggtgagaattggtgtcttgtctgaagacaagaagaagttggattatgtcttggctttg 6710
Query: 241 aaggttgaagatttcttggaaagaagattgcmaacccaagtctacaagttgggtttggcc 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6711 aaggttgaagatttcttggaaagaagattgcaaacccaagtctacaagttgggtttggcc 6770
Query: 301 aagtctgttcaccacgctagagtcttgatctcccaaagacacattgctgttggtaagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6771 aagtctgttcaccacgctagagtcttgatctcccaaagacacattgctgttggtaagcaa 6830
Query: 361 atcgtcaacatcccatctttcatggtcagattggaatctgagaagcacattgacttcgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6831 atcgtcaacatcccatctttcatggtcagattggaatctgagaagcacattgacttcgct 6890
Query: 421 agaacctctccattcggtggtgctagaccaggtagagtggccagaaagagagctgctgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6891 agaacctctccattcggtggtgctagaccaggtagagtggccagaaagagagctgctgct 6950
Query: 481 gctggtggtgaagaagctgacgaagaataaacgcattcaaaaactacacaaaaaactaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6951 gctggtggtgaagaagctgacgaagaataaacgcattcaaaaactacacaaaaaactaca 7010
Query: 541 attgctgaaaacaactaatgtttcagcatcacttttttatattagcttttgatcattttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7011 attgctgaaaacaactaatgtttcagcatcacttttttatattagcttttgatcattttg 7070
Query: 601 cctttacttctttttcttttcaacttcatttcagagtttttatgatggttaagaagctga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7071 cctttacttctttttcttttcaacttcatttcagagtttttatgatggttaagaagctga 7130
Query: 661 tcccaactattcactgctgtgttgtgtatatagaattaacatctttctcatgtgattgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7131 tcccaactattcactgctgtgttgtgtatatagaattaacatctttctcatgtgattgat 7190
Query: 721 ttaagcagaaaacagaaacaaaactagtgtagcagtttcatttaatatcatttatctctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7191 ttaagcagaaaacagaaacaaaactagtgtagcagtttcatttaatatcatttatctctg 7250
Query: 781 ttttacaaaaacggtattttaaggtgtatattacgataattaattaatggttttcttaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7251 ttttacaaaaacggtattttaaggtgtatattacgataattaattaatggttttcttaca 7310
Query: 841 gtgagatcattttaactacgttcaagttgtcttggctcgttgagaaaccataacaaaata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7311 gtgagatcattttaactacgttcaagttgtcttggctcgttgagaaaccataacaaaata 7370
Query: 901 tataccagtttacctttcacggtacattgctt-aaaaacgtcgaaag-matctctttc-a 957
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
Sbjct: 7371 tataccagtttacctttcacggtacattgcttaaaaaacgtcgaaagacatctctttcaa 7430
Query: 958 ctcattccgtca-ttcgacaaga 979
|||||||||||| ||||||||||
Sbjct: 7431 ctcattccgtcatttcgacaaga 7453
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9778
Number of Sequences: 1807
Number of extensions: 9778
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)